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{2023.06}[icelake,cascadelake] EasyStacks batch 13: 052 - 055 #1069

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Merged
merged 8 commits into from
May 6, 2025
Merged

{2023.06}[icelake,cascadelake] EasyStacks batch 13: 052 - 055 #1069

merged 8 commits into from
May 6, 2025

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casparvl
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@casparvl casparvl commented May 4, 2025

This can be synced with upstream once #1065 is merged. Then, it can be built.

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eessi-bot bot commented May 4, 2025

Instance eessi-bot-mc-aws is configured to build for:

  • architectures: x86_64/generic, x86_64/intel/haswell, x86_64/intel/sapphirerapids, x86_64/intel/skylake_avx512, x86_64/intel/cascadelake, x86_64/intel/icelake, x86_64/amd/zen2, x86_64/amd/zen3, aarch64/generic, aarch64/neoverse_n1, aarch64/neoverse_v1
  • repositories: eessi.io-2023.06-compat, eessi.io-2023.06-software

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eessi-bot bot commented May 4, 2025

Instance eessi-bot-mc-azure is configured to build for:

  • architectures: x86_64/amd/zen4
  • repositories: eessi.io-2023.06-compat, eessi.io-2023.06-software

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eessi-bot-surf bot commented May 4, 2025

Instance eessi-bot-surf is configured to build for:

  • architectures: x86_64/amd/zen4, x86_64/amd/zen2
  • repositories: eessi-hpc.org-2023.06-software, eessi.io-2023.06-software, eessi.io-2023.06-compat, eessi-hpc.org-2023.06-compat

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gpu-bot-ugent bot commented May 4, 2025

Instance eessi-bot-vsc-ugent is configured to build for:

  • architectures: x86_64/amd/zen3
  • repositories: eessi-hpc.org-2023.06-software, eessi.io-2023.06-compat, eessi-hpc.org-2023.06-compat, eessi.io-2023.06-software

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Instance rt-Grace-jr is configured to build for:

  • architectures: aarch64/nvidia/grace
  • repositories: eessi.io-2023.06-software

@casparvl casparvl mentioned this pull request May 4, 2025
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@casparvl casparvl changed the title {2023.06}[icelake,cascadelake] EasyStacks batch 12: 052 - 055 {2023.06}[icelake,cascadelake] EasyStacks batch 13: 052 - 055 May 4, 2025
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bedroge commented May 4, 2025

bot: build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:icelake
bot: build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake

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Updates by the bot instance eessi-bot-mc-aws (click for details)

  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:icelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake

  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake resulted in:

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake resulted in:

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  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:icelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake

  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake resulted in:

    • no jobs were submitted

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake resulted in:

    • no jobs were submitted

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  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:icelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake

  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake resulted in:

    • no jobs were submitted

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake resulted in:

    • no jobs were submitted

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  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:icelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake

  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake resulted in:

    • no jobs were submitted

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake resulted in:

    • no jobs were submitted

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New job on instance eessi-bot-mc-aws for CPU micro-architecture x86_64-intel-icelake for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2025.05/pr_1069/60824

date job status comment
May 04 12:20:27 UTC 2025 submitted job id 60824 awaits release by job manager
May 04 12:21:20 UTC 2025 released job awaits launch by Slurm scheduler
May 04 12:27:24 UTC 2025 running job 60824 is running
May 04 18:51:27 UTC 2025 finished
😢 FAILURE (click triangle for details)
Details
✅ job output file slurm-60824.out
✅ no message matching FATAL:
❌ found message matching ERROR:
❌ found message matching FAILED:
❌ found message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-intel-icelake-17463836570.tar.gzsize: 1613 MiB (1691400711 bytes)
entries: 69585
modules under 2023.06/software/linux/x86_64/intel/icelake/modules/all
arrow-R/14.0.1-foss-2023a-R-4.3.2.lua
mpi4py/3.1.5-gompi-2023b.lua
networkx/3.2.1-gfbf-2023b.lua
R-bundle-CRAN/2023.12-foss-2023a.lua
scikit-build-core/0.9.3-GCCcore-13.2.0.lua
software under 2023.06/software/linux/x86_64/intel/icelake/software
arrow-R/14.0.1-foss-2023a-R-4.3.2
mpi4py/3.1.5-gompi-2023b
networkx/3.2.1-gfbf-2023b
R-bundle-CRAN/2023.12-foss-2023a
scikit-build-core/0.9.3-GCCcore-13.2.0
other under 2023.06/software/linux/x86_64/intel/icelake
no other files in tarball
May 04 18:51:27 UTC 2025 test result
😢 FAILURE (click triangle for details)
Reason
EESSI test suite was not run, test step itself failed to execute.
Details
✅ job output file slurm-60824.out
❌ found message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

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New job on instance eessi-bot-mc-aws for CPU micro-architecture x86_64-intel-cascadelake for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2025.05/pr_1069/60825

date job status comment
May 04 12:20:32 UTC 2025 submitted job id 60825 awaits release by job manager
May 04 12:21:19 UTC 2025 released job awaits launch by Slurm scheduler
May 04 12:27:23 UTC 2025 running job 60825 is running
May 04 19:46:27 UTC 2025 finished
😢 FAILURE (click triangle for details)
Details
✅ job output file slurm-60825.out
✅ no message matching FATAL:
❌ found message matching ERROR:
❌ found message matching FAILED:
❌ found message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-intel-cascadelake-17463867210.tar.gzsize: 1613 MiB (1692137872 bytes)
entries: 69585
modules under 2023.06/software/linux/x86_64/intel/cascadelake/modules/all
arrow-R/14.0.1-foss-2023a-R-4.3.2.lua
mpi4py/3.1.5-gompi-2023b.lua
networkx/3.2.1-gfbf-2023b.lua
R-bundle-CRAN/2023.12-foss-2023a.lua
scikit-build-core/0.9.3-GCCcore-13.2.0.lua
software under 2023.06/software/linux/x86_64/intel/cascadelake/software
arrow-R/14.0.1-foss-2023a-R-4.3.2
mpi4py/3.1.5-gompi-2023b
networkx/3.2.1-gfbf-2023b
R-bundle-CRAN/2023.12-foss-2023a
scikit-build-core/0.9.3-GCCcore-13.2.0
other under 2023.06/software/linux/x86_64/intel/cascadelake
no other files in tarball
May 04 19:46:27 UTC 2025 test result
😢 FAILURE (click triangle for details)
Reason
EESSI test suite was not run, test step itself failed to execute.
Details
✅ job output file slurm-60825.out
❌ found message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

@bedroge bedroge added the 2023.06-software.eessi.io 2023.06 version of software.eessi.io label May 4, 2025
@bedroge bedroge marked this pull request as ready for review May 4, 2025 12:44
@bedroge bedroge mentioned this pull request May 4, 2025
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bedroge commented May 4, 2025

GROMACS 2024.1 build failed because of:

== Avoiding use of SVE instructions for GROMACS 2024.1 by using ARM_NEON_ASIMD as GMX_SIMD value

Caused by an issue with the hook, fixed in #1074.

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bedroge commented May 4, 2025

bot: build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:icelake
bot: build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake

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  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:icelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake

  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake resulted in:

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake resulted in:

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  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:icelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake

  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake resulted in:

    • no jobs were submitted

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake resulted in:

    • no jobs were submitted

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  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:icelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake

  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake resulted in:

    • no jobs were submitted

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake resulted in:

    • no jobs were submitted

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  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:icelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake

  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake resulted in:

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake resulted in:

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  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:icelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake

  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake resulted in:

    • no jobs were submitted

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake resulted in:

    • no jobs were submitted

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  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:icelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake

  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake resulted in:

    • no jobs were submitted

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake resulted in:

    • no jobs were submitted

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  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:icelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake

  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake resulted in:

    • no jobs were submitted

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake resulted in:

    • no jobs were submitted

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New job on instance eessi-bot-mc-aws for CPU micro-architecture x86_64-intel-icelake for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2025.05/pr_1069/60828

date job status comment
May 04 21:08:53 UTC 2025 submitted job id 60828 awaits release by job manager
May 04 21:09:42 UTC 2025 released job awaits launch by Slurm scheduler
May 04 21:10:46 UTC 2025 running job 60828 is running
May 05 02:54:07 UTC 2025 finished
😢 FAILURE (click triangle for details)
Details
✅ job output file slurm-60828.out
✅ no message matching FATAL:
❌ found message matching ERROR:
❌ found message matching FAILED:
❌ found message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-intel-icelake-17464126320.tar.gzsize: 1613 MiB (1691361698 bytes)
entries: 69586
modules under 2023.06/software/linux/x86_64/intel/icelake/modules/all
arrow-R/14.0.1-foss-2023a-R-4.3.2.lua
mpi4py/3.1.5-gompi-2023b.lua
networkx/3.2.1-gfbf-2023b.lua
R-bundle-CRAN/2023.12-foss-2023a.lua
scikit-build-core/0.9.3-GCCcore-13.2.0.lua
software under 2023.06/software/linux/x86_64/intel/icelake/software
arrow-R/14.0.1-foss-2023a-R-4.3.2
mpi4py/3.1.5-gompi-2023b
networkx/3.2.1-gfbf-2023b
R-bundle-CRAN/2023.12-foss-2023a
scikit-build-core/0.9.3-GCCcore-13.2.0
other under 2023.06/software/linux/x86_64/intel/icelake
2023.06/init/easybuild/eb_hooks.py
May 05 02:54:07 UTC 2025 test result
😢 FAILURE (click triangle for details)
Reason
EESSI test suite was not run, test step itself failed to execute.
Details
✅ job output file slurm-60828.out
❌ found message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

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New job on instance eessi-bot-mc-aws for CPU micro-architecture x86_64-intel-cascadelake for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2025.05/pr_1069/60829

date job status comment
May 04 21:08:58 UTC 2025 submitted job id 60829 awaits release by job manager
May 04 21:09:40 UTC 2025 released job awaits launch by Slurm scheduler
May 04 21:10:44 UTC 2025 running job 60829 is running
May 05 04:28:57 UTC 2025 finished
😢 FAILURE (click triangle for details)
Details
✅ job output file slurm-60829.out
✅ no message matching FATAL:
❌ found message matching ERROR:
❌ found message matching FAILED:
❌ found message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-intel-cascadelake-17464180720.tar.gzsize: 1613 MiB (1692086281 bytes)
entries: 69586
modules under 2023.06/software/linux/x86_64/intel/cascadelake/modules/all
arrow-R/14.0.1-foss-2023a-R-4.3.2.lua
mpi4py/3.1.5-gompi-2023b.lua
networkx/3.2.1-gfbf-2023b.lua
R-bundle-CRAN/2023.12-foss-2023a.lua
scikit-build-core/0.9.3-GCCcore-13.2.0.lua
software under 2023.06/software/linux/x86_64/intel/cascadelake/software
arrow-R/14.0.1-foss-2023a-R-4.3.2
mpi4py/3.1.5-gompi-2023b
networkx/3.2.1-gfbf-2023b
R-bundle-CRAN/2023.12-foss-2023a
scikit-build-core/0.9.3-GCCcore-13.2.0
other under 2023.06/software/linux/x86_64/intel/cascadelake
2023.06/init/easybuild/eb_hooks.py
May 05 04:28:57 UTC 2025 test result
😢 FAILURE (click triangle for details)
Reason
EESSI test suite was not run, test step itself failed to execute.
Details
✅ job output file slurm-60829.out
❌ found message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case

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bedroge commented May 5, 2025

There was another issue in the if statement, trying again.

bot: build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:icelake
bot: build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake

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  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:icelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake

  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake resulted in:

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  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake resulted in:

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  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:icelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake

  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake resulted in:

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  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake resulted in:

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    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake

  • received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:cascadelake from bedroge

    • expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:cascadelake

  • handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:icelake resulted in:

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New job on instance eessi-bot-mc-aws for CPU micro-architecture x86_64-intel-icelake for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2025.05/pr_1069/61038

date job status comment
May 05 06:36:08 UTC 2025 submitted job id 61038 awaits release by job manager
May 05 06:36:12 UTC 2025 released job awaits launch by Slurm scheduler
May 05 06:41:17 UTC 2025 running job 61038 is running
May 05 15:48:28 UTC 2025 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-61038.out
✅ no message matching FATAL:
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-intel-icelake-17464585020.tar.gzsize: 3643 MiB (3820017891 bytes)
entries: 98454
modules under 2023.06/software/linux/x86_64/intel/icelake/modules/all
arrow-R/14.0.1-foss-2023a-R-4.3.2.lua
ASE/3.22.1-gfbf-2022b.lua
Biopython/1.83-foss-2023a.lua
BLAST+/2.14.1-gompi-2023a.lua
cimfomfa/22.273-GCCcore-12.3.0.lua
cpio/2.15-GCCcore-12.3.0.lua
cppy/1.2.1-GCCcore-12.2.0.lua
DendroPy/4.5.2-GCCcore-12.2.0.lua
DIAMOND/2.1.8-GCC-12.3.0.lua
ESPResSo/4.2.2-foss-2023a.lua
FastME/2.1.6.3-GCC-12.3.0.lua
FFmpeg/5.1.2-GCCcore-12.2.0.lua
ffnvcodec/11.1.5.2.lua
Flask/2.2.3-GCCcore-12.2.0.lua
GATK/4.5.0.0-GCCcore-12.3.0-Java-17.lua
GROMACS/2024.1-foss-2023b.lua
ipympl/0.9.3-gfbf-2023a.lua
ISA-L/2.30.0-GCCcore-12.3.0.lua
Java/17.0.6.lua
Java/.modulerc.lua
LMDB/0.9.31-GCCcore-12.3.0.lua
matplotlib/3.7.0-gfbf-2022b.lua
MCL/22.282-GCCcore-12.3.0.lua
MMseqs2/14-7e284-gompi-2023a.lua
mpi4py/3.1.5-gompi-2023b.lua
networkx/3.2.1-gfbf-2023b.lua
NLTK/3.8.1-foss-2023b.lua
OrthoFinder/2.5.5-foss-2023a.lua
ParaView/5.11.1-foss-2022b.lua
Pillow/9.4.0-GCCcore-12.2.0.lua
pyfaidx/0.8.1.1-GCCcore-12.3.0.lua
Pysam/0.22.0-GCC-12.3.0.lua
python-isal/1.1.0-GCCcore-12.3.0.lua
R-bundle-CRAN/2023.12-foss-2023a.lua
scikit-build-core/0.9.3-GCCcore-13.2.0.lua
scikit-learn/1.4.0-gfbf-2023b.lua
SDL2/2.26.3-GCCcore-12.2.0.lua
SEPP/4.5.1-foss-2022b.lua
spglib-python/2.0.2-gfbf-2022b.lua
Tkinter/3.10.8-GCCcore-12.2.0.lua
tqdm/4.66.2-GCCcore-13.2.0.lua
Valgrind/3.21.0-gompi-2022b.lua
Valgrind/3.21.0-gompi-2023a.lua
Valgrind/3.23.0-gompi-2023b.lua
WhatsHap/2.2-foss-2023a.lua
x264/20230226-GCCcore-12.2.0.lua
x265/3.5-GCCcore-12.2.0.lua
Yasm/1.3.0-GCCcore-12.2.0.lua
software under 2023.06/software/linux/x86_64/intel/icelake/software
arrow-R/14.0.1-foss-2023a-R-4.3.2
ASE/3.22.1-gfbf-2022b
Biopython/1.83-foss-2023a
BLAST+/2.14.1-gompi-2023a
cimfomfa/22.273-GCCcore-12.3.0
cpio/2.15-GCCcore-12.3.0
cppy/1.2.1-GCCcore-12.2.0
DendroPy/4.5.2-GCCcore-12.2.0
DIAMOND/2.1.8-GCC-12.3.0
ESPResSo/4.2.2-foss-2023a
FastME/2.1.6.3-GCC-12.3.0
FFmpeg/5.1.2-GCCcore-12.2.0
ffnvcodec/11.1.5.2
Flask/2.2.3-GCCcore-12.2.0
GATK/4.5.0.0-GCCcore-12.3.0-Java-17
GROMACS/2024.1-foss-2023b
ipympl/0.9.3-gfbf-2023a
ISA-L/2.30.0-GCCcore-12.3.0
Java/17.0.6
LMDB/0.9.31-GCCcore-12.3.0
matplotlib/3.7.0-gfbf-2022b
MCL/22.282-GCCcore-12.3.0
MMseqs2/14-7e284-gompi-2023a
mpi4py/3.1.5-gompi-2023b
networkx/3.2.1-gfbf-2023b
NLTK/3.8.1-foss-2023b
OrthoFinder/2.5.5-foss-2023a
ParaView/5.11.1-foss-2022b
Pillow/9.4.0-GCCcore-12.2.0
pyfaidx/0.8.1.1-GCCcore-12.3.0
Pysam/0.22.0-GCC-12.3.0
python-isal/1.1.0-GCCcore-12.3.0
R-bundle-CRAN/2023.12-foss-2023a
scikit-build-core/0.9.3-GCCcore-13.2.0
scikit-learn/1.4.0-gfbf-2023b
SDL2/2.26.3-GCCcore-12.2.0
SEPP/4.5.1-foss-2022b
spglib-python/2.0.2-gfbf-2022b
Tkinter/3.10.8-GCCcore-12.2.0
tqdm/4.66.2-GCCcore-13.2.0
Valgrind/3.21.0-gompi-2022b
Valgrind/3.21.0-gompi-2023a
Valgrind/3.23.0-gompi-2023b
WhatsHap/2.2-foss-2023a
x264/20230226-GCCcore-12.2.0
x265/3.5-GCCcore-12.2.0
Yasm/1.3.0-GCCcore-12.2.0
other under 2023.06/software/linux/x86_64/intel/icelake
2023.06/init/easybuild/eb_hooks.py
May 05 15:48:28 UTC 2025 test result
😢 FAILURE (click triangle for details)
Reason
EESSI test suite was not run, test step itself failed to execute.
Details
✅ job output file slurm-61038.out
❌ found message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case
May 06 07:59:50 UTC 2025 uploaded transfer of eessi-2023.06-software-linux-x86_64-intel-icelake-17464585020.tar.gz to S3 bucket succeeded

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New job on instance eessi-bot-mc-aws for CPU micro-architecture x86_64-intel-cascadelake for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2025.05/pr_1069/61039

date job status comment
May 05 06:36:14 UTC 2025 submitted job id 61039 awaits release by job manager
May 05 06:37:15 UTC 2025 released job awaits launch by Slurm scheduler
May 05 06:42:20 UTC 2025 running job 61039 is running
May 05 17:49:41 UTC 2025 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-61039.out
✅ no message matching FATAL:
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-intel-cascadelake-17464653550.tar.gzsize: 3642 MiB (3819701539 bytes)
entries: 98454
modules under 2023.06/software/linux/x86_64/intel/cascadelake/modules/all
arrow-R/14.0.1-foss-2023a-R-4.3.2.lua
ASE/3.22.1-gfbf-2022b.lua
Biopython/1.83-foss-2023a.lua
BLAST+/2.14.1-gompi-2023a.lua
cimfomfa/22.273-GCCcore-12.3.0.lua
cpio/2.15-GCCcore-12.3.0.lua
cppy/1.2.1-GCCcore-12.2.0.lua
DendroPy/4.5.2-GCCcore-12.2.0.lua
DIAMOND/2.1.8-GCC-12.3.0.lua
ESPResSo/4.2.2-foss-2023a.lua
FastME/2.1.6.3-GCC-12.3.0.lua
FFmpeg/5.1.2-GCCcore-12.2.0.lua
ffnvcodec/11.1.5.2.lua
Flask/2.2.3-GCCcore-12.2.0.lua
GATK/4.5.0.0-GCCcore-12.3.0-Java-17.lua
GROMACS/2024.1-foss-2023b.lua
ipympl/0.9.3-gfbf-2023a.lua
ISA-L/2.30.0-GCCcore-12.3.0.lua
Java/17.0.6.lua
Java/.modulerc.lua
LMDB/0.9.31-GCCcore-12.3.0.lua
matplotlib/3.7.0-gfbf-2022b.lua
MCL/22.282-GCCcore-12.3.0.lua
MMseqs2/14-7e284-gompi-2023a.lua
mpi4py/3.1.5-gompi-2023b.lua
networkx/3.2.1-gfbf-2023b.lua
NLTK/3.8.1-foss-2023b.lua
OrthoFinder/2.5.5-foss-2023a.lua
ParaView/5.11.1-foss-2022b.lua
Pillow/9.4.0-GCCcore-12.2.0.lua
pyfaidx/0.8.1.1-GCCcore-12.3.0.lua
Pysam/0.22.0-GCC-12.3.0.lua
python-isal/1.1.0-GCCcore-12.3.0.lua
R-bundle-CRAN/2023.12-foss-2023a.lua
scikit-build-core/0.9.3-GCCcore-13.2.0.lua
scikit-learn/1.4.0-gfbf-2023b.lua
SDL2/2.26.3-GCCcore-12.2.0.lua
SEPP/4.5.1-foss-2022b.lua
spglib-python/2.0.2-gfbf-2022b.lua
Tkinter/3.10.8-GCCcore-12.2.0.lua
tqdm/4.66.2-GCCcore-13.2.0.lua
Valgrind/3.21.0-gompi-2022b.lua
Valgrind/3.21.0-gompi-2023a.lua
Valgrind/3.23.0-gompi-2023b.lua
WhatsHap/2.2-foss-2023a.lua
x264/20230226-GCCcore-12.2.0.lua
x265/3.5-GCCcore-12.2.0.lua
Yasm/1.3.0-GCCcore-12.2.0.lua
software under 2023.06/software/linux/x86_64/intel/cascadelake/software
arrow-R/14.0.1-foss-2023a-R-4.3.2
ASE/3.22.1-gfbf-2022b
Biopython/1.83-foss-2023a
BLAST+/2.14.1-gompi-2023a
cimfomfa/22.273-GCCcore-12.3.0
cpio/2.15-GCCcore-12.3.0
cppy/1.2.1-GCCcore-12.2.0
DendroPy/4.5.2-GCCcore-12.2.0
DIAMOND/2.1.8-GCC-12.3.0
ESPResSo/4.2.2-foss-2023a
FastME/2.1.6.3-GCC-12.3.0
FFmpeg/5.1.2-GCCcore-12.2.0
ffnvcodec/11.1.5.2
Flask/2.2.3-GCCcore-12.2.0
GATK/4.5.0.0-GCCcore-12.3.0-Java-17
GROMACS/2024.1-foss-2023b
ipympl/0.9.3-gfbf-2023a
ISA-L/2.30.0-GCCcore-12.3.0
Java/17.0.6
LMDB/0.9.31-GCCcore-12.3.0
matplotlib/3.7.0-gfbf-2022b
MCL/22.282-GCCcore-12.3.0
MMseqs2/14-7e284-gompi-2023a
mpi4py/3.1.5-gompi-2023b
networkx/3.2.1-gfbf-2023b
NLTK/3.8.1-foss-2023b
OrthoFinder/2.5.5-foss-2023a
ParaView/5.11.1-foss-2022b
Pillow/9.4.0-GCCcore-12.2.0
pyfaidx/0.8.1.1-GCCcore-12.3.0
Pysam/0.22.0-GCC-12.3.0
python-isal/1.1.0-GCCcore-12.3.0
R-bundle-CRAN/2023.12-foss-2023a
scikit-build-core/0.9.3-GCCcore-13.2.0
scikit-learn/1.4.0-gfbf-2023b
SDL2/2.26.3-GCCcore-12.2.0
SEPP/4.5.1-foss-2022b
spglib-python/2.0.2-gfbf-2022b
Tkinter/3.10.8-GCCcore-12.2.0
tqdm/4.66.2-GCCcore-13.2.0
Valgrind/3.21.0-gompi-2022b
Valgrind/3.21.0-gompi-2023a
Valgrind/3.23.0-gompi-2023b
WhatsHap/2.2-foss-2023a
x264/20230226-GCCcore-12.2.0
x265/3.5-GCCcore-12.2.0
Yasm/1.3.0-GCCcore-12.2.0
other under 2023.06/software/linux/x86_64/intel/cascadelake
2023.06/init/easybuild/eb_hooks.py
May 05 17:49:41 UTC 2025 test result
😢 FAILURE (click triangle for details)
Reason
EESSI test suite was not run, test step itself failed to execute.
Details
✅ job output file slurm-61039.out
❌ found message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case
May 06 08:00:47 UTC 2025 uploaded transfer of eessi-2023.06-software-linux-x86_64-intel-cascadelake-17464653550.tar.gz to S3 bucket succeeded

@bedroge bedroge added ready-to-deploy Mark a PR as ready to deploy ready-to-review labels May 5, 2025
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bedroge commented May 5, 2025

Note that this also includes the hook from #1074, can be deployed here.

@ocaisa ocaisa added bot:deploy Ask bot to deploy missing software installations to EESSI and removed ready-to-deploy Mark a PR as ready to deploy ready-to-review labels May 6, 2025
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Label bot:deploy has been set by user ocaisa, but this person does not have permission to trigger deployments

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ocaisa commented May 6, 2025

Staging PRs ingested

@ocaisa ocaisa merged commit 63b883e into EESSI:2023.06-software.eessi.io May 6, 2025
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eessi-bot bot commented May 6, 2025

PR merged! Moved ['/project/def-users/SHARED/jobs/2025.05/pr_1069/60824', '/project/def-users/SHARED/jobs/2025.05/pr_1069/60825', '/project/def-users/SHARED/jobs/2025.05/pr_1069/60826', '/project/def-users/SHARED/jobs/2025.05/pr_1069/60827', '/project/def-users/SHARED/jobs/2025.05/pr_1069/60828', '/project/def-users/SHARED/jobs/2025.05/pr_1069/60829', '/project/def-users/SHARED/jobs/2025.05/pr_1069/61038', '/project/def-users/SHARED/jobs/2025.05/pr_1069/61039'] to /project/def-users/SHARED/trash_bin/EESSI/software-layer/2025.05.06

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eessi-bot bot commented May 6, 2025

PR merged! Moved [] to /project/def-users/SHARED/trash_bin/EESSI/software-layer/2025.05.06

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gpu-bot-ugent bot commented May 6, 2025

PR merged! Moved [] to /scratch/gent/vo/002/gvo00211/SHARED/trash_bin/EESSI/software-layer/2025.05.06

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@ocaisa ocaisa ocaisa approved these changes

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@casparvl @bedroge @ocaisa